CDS

Accession Number TCMCG015C47599
gbkey CDS
Protein Id XP_027080342.1
Location 6660189..6660908
Gene LOC113703239
GeneID 113703239
Organism Coffea arabica

Protein

Length 239aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027224541.1
Definition DNA-directed RNA polymerase III subunit RPC6-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03025        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTCGTTCGATGAATGCTTCTTCTCTCAAGCGTAAAAGACCAGAATCGAGTTCTGCCAATGGGTCTCTTGTTGATGCTGATCGTGCAGTTTTCAATGTGATAAAGAGTAAAGAAGATATGGGAATTTGGACTAGGGATATAAAATTTGAGACGAATCTTGCTGATACTGTCGTCAATAAATCTCTGAAGTCGCTTCTAAGTAAGAAGTTGATAAAAGAGGTTGTCAACATCAAGAACAAGGGGAGAAAGCATTACATGGCAGCAGAGTTTGAACCGTCAAAGGAAGTTACTGGTGGTGCATGGTATGTGGATGGAAATCTTGATAAAGAACTCATTGGTGTTCTTAAAGGCCTCTGCTTGAAGATAATCAATTCTAAGAAGGTTGCAACTGTTGAAGGAGTTTATGACTTTTTGAACAAGAGCAAAGTCACCACATTTGATTGCACAAATCAACAAATTGCGGAGGTTTTGAACTCTATGGTATTGGACAATGAGGTCATAGAGGTTAAAAGCACTGGCTTGGGAGAATATCACTCTATTCCTATTGGAACTGTATGTTACAGGATTGCAAAAGGAGCTGGTCTTGGAGAGAGTCTCAAGATTGGGGCAATGGCTTCGATTCCATGTGGTATGTGTCCACGAATTAGCCAATGTACACCTGATGGAGTTATTTCTCCTAGAACTTGTGTGTATTACCAGAAATGGATGAATTTTTAA
Protein:  
MSRSMNASSLKRKRPESSSANGSLVDADRAVFNVIKSKEDMGIWTRDIKFETNLADTVVNKSLKSLLSKKLIKEVVNIKNKGRKHYMAAEFEPSKEVTGGAWYVDGNLDKELIGVLKGLCLKIINSKKVATVEGVYDFLNKSKVTTFDCTNQQIAEVLNSMVLDNEVIEVKSTGLGEYHSIPIGTVCYRIAKGAGLGESLKIGAMASIPCGMCPRISQCTPDGVISPRTCVYYQKWMNF